Gwas yield network
WebDec 5, 2024 · Background Identification of loci for agronomic traits and characterization of their genetic architecture are crucial in marker-assisted selection (MAS). Genome-wide association studies (GWAS) have increasingly been used as potent tools in identifying marker-trait associations (MTAs). The introduction of new adaptive alleles in the diverse … WebCombined GWAS and eQTL analysis uncovers a genetic regulatory network orchestrating the initiation of secondary cell wall development in cotton: ... Leaf carbohydrates assimilation and metabolism affect seed yield of rapeseed with different waterlogging tolerance under the interactive effects of nitrogen and waterlogging:
Gwas yield network
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WebGWAS is listed in the World's largest and most authoritative dictionary database of abbreviations and acronyms GWAS - What does GWAS stand for? The Free Dictionary WebApr 5, 2024 · GWAS of population growth traits. To identify candidate genes regulating the growth and development of P. cathayana under N treatment, we conducted GWAS analysis on genotypes significantly promoted by Ratio-PH and Ratio-GD (Fig. 1a, c and Fig. S2a, c). Among them, Ratio-PH was associated with 9 significant single nucleotide polymorphism …
WebMar 24, 2024 · Plant height plays a crucial role in lodging and thus affects yield and grain quality. ... By further appraising these GWAS methods, the pLARmEB and FarmCPU models outperformed in SNP detection ... WebFeb 5, 2024 · The genes with a joint P < 0.05 for milk yield were defined as the nominally significant GWAS gene set (NSGG) for further analysis. Co-expression Network Analysis for the DEGs and NSGG For the gene expression matrix from the DEGs and NSGG, we employed the WGCNA R-package ( Langfelder and Horvath, 2008 ) to conduct the co …
WebApr 12, 2024 · Yield is one of the most important traits of arabica coffee. Plant breeders seek to maximize yield directly or indirectly, using other related traits. The standard multi-trait genome-wide association study (MTM-GWAS) does not accommodate the network structure of phenotypes, therefore, does not address how traits are interrelated. We … WebApr 12, 2024 · Manhattan plots for direct (A), indirect (B), and total (C) single-nucleotide polymorphism effects on yield (YL) obtained using SEM-GWAS based on the network structure learned by the Hill Climbing ...
WebAug 13, 2024 · GWAS has been proven to be efficient in identifying molecular markers associated with yield in soybean as well. Four SNPs were found to be associated with yield across multiple environments via …
WebAug 10, 2024 · Improving the overall production of rice with high quality is a major target of breeders. Mining potential yield-related loci have been geared towards developing efficient rice breeding strategies. In this study, one single-locus genome-wide association studies (SL-GWAS) method (MLM) in conjunction with five multi-locus genome-wide association … lake sonoma swimmingWebApr 10, 2024 · The projected rise in global ambient temperature by 3–5 °C by the end of this century, along with unpredicted heat waves during critical crop growth stages, can drastically reduce grain yield and will pose a great food security challenge. It is therefore important to identify wheat genetic resources able to withstand high … asola open jobWebThe expression QTL (eQTL) analysis is the association between the genetic variant and gene expression, which is also an important tool to elucidate complex phenotypes. Combining GWAS and TWAS with the eQTL analysis, the genetic regulatory network for cell wall biosynthesis in cotton has been uncovered (Li et al., 2024). lakes ontarioWebFeb 4, 2024 · The low number of yield QTL in our study corroborate with other GWAS for yield in wheat, where most of the identified loci have very small effects. Citation: Garcia M, Eckermann P, Haefele S, Satija S, Sznajder B, Timmins A, et al. (2024) Genome-wide association mapping of grain yield in a diverse collection of spring wheat ( Triticum … lakes on olympic peninsula waWebNov 11, 2024 · network{including both stable and transient interactions{thus capturing e ects of molecular mechanisms taking place in diverse cells and tissues, and of various kinetics. More precisely, each sample iin the GWAS data set is represented as a graph G i = (V;E), where V is the set of nodes and Eis the set of edges in the PPI network. asola-rekola omakotiyhdistysWebFeb 6, 2024 · Understanding the genetic bases of economically important traits is fundamentally important in enhancing genetic gains in durum wheat. In this study, a durum panel of 208 lines (comprised of elite materials and exotics from the International Maize and Wheat Improvement Center gene bank) were subjected to genome wide association … lakes on the mississippi riverWebApr 4, 2024 · Sorghum bicolor (L.) is one of the oldest crops cultivated by human beings which has been used in food and wine making. To understand the genetic diversity of sorghum breeding resources and further guide molecular-marker-assisted breeding, six yield-related traits were analyzed for 214 sorghum germplasm from all over the world, … lake soulajule